BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F07SP1|AL426073
(328 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig168 299 3e-81
>3x_Contig168
Length = 941
Score = 299 bits (147), Expect = 3e-81
Identities = 162/173 (93%)
Strand = Plus / Minus
Query: 95 ttattattattaaakaawaavagattaavtagatctttaaataaaacttatatttgagat 154
|||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||
Sbjct: 191 ttattattattaaataataaaagattaaatagatctttaaataaaacttatatttgagat 132
Query: 155 tatttaaatgaattaagtaataaaggkgtaaaattacaacatttaaataawaawaawact 214
|||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||
Sbjct: 131 tatttaaatgaattaagtaataaaggtgtaaaattacaacatttaaataatattaattct 72
Query: 215 tgatcatctcaaattwataaatttaataaaactgaagaaattaataatactat 267
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgatcatctcaaatttataaatttaataaaactgaagaaattaataatactat 19
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6163
Number of Sequences: 1807
Number of extensions: 6163
Number of successful extensions: 527
Number of sequences better than 1.0e-20: 1
length of query: 328
length of database: 10,358,551
effective HSP length: 15
effective length of query: 313
effective length of database: 10,331,446
effective search space: 3233742598
effective search space used: 3233742598
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)